
Code and Data
Code
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preprocessing.py | Functions to preprocessing microtubule catastrophe data.
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modeling.py | Functions for modeling microtubule catastrophe data
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plotting.py | Functions to plot microtubule catastrophe data
Data Sets
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Microtubule Catastrophe Times for Labeled and Unlabeled Tubulin | (filetype: .csv)(4.5 KB)
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Microtubule Catastrophe Times for Different Tubulin Concentrations | (filetype: .csv)(10.9 KB)
Figure Generation
ECDF of Times to Catastrophe for Labeled vs Unlabeled Tubulin with Confidence Intervals
Necessary Data Sets- Microtubule Catastrophe Times for Labeled and Unlabeled Tubulin
Analytical CDF vs ECDF for Simulated Times to Catastrophe
Necessary Data Sets- Microtubule Catastrophe Times for Labeled and Unlabeled Tubulin
ECDFs for Time to Catastrohpe for Different Beta2/Beta1
Necessary Data SetsConfidence Intervals of Beta Rates for both the Gamma and Custom Model
Necessary Data Sets- Microtubule Catastrophe Times for Labeled and Unlabeled Tubulin
Gamma Model QQ Plot
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations
QQ Plot for the Custom model
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations
Gamma model predictive ECDF
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations
Predictive ECDF for the Custom model
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations
Gamma Model Predictive ECDF Differences
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations
Custom Model Predictive ECDF Differences
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations
Confidence intervals for the parameter $\alpha$ in the Gamma model for various tubulin concentrations.
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations
Confidence intervals for the parameter $\beta$ in the Gamma model for various tubulin concentrations.
Necessary Data Sets- Microtubule Catastrophe Times for Different Tubulin Concentrations